BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013E06LP1|AL426535
(403 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1370 790 0.0
>3x_Contig1370
Length = 5848
Score = 790 bits (398), Expect = 0.0
Identities = 399/400 (99%)
Strand = Plus / Plus
Query: 1 aatacctacctaaactacagagatttatgttatgtgcgatattcactccttaaaactgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aatacctacctaaactacagagatttatgttatgtgcgatattcactccttaaaactgat 273
Query: 61 gaaatctgcctaccagtttgaagcagagtcggatgatcgcatagttgattctcaataagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gaaatctgcctaccagtttgaagcagagtcggatgatcgcatagttgattctcaataagg 333
Query: 121 cgacaagcacaatccaagggcagcccgtacatttgcgtagttaagggctgagagagctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cgacaagcacaatccaagggcagcccgtacatttgcgtagttaagggctgagagagctct 393
Query: 181 gtgaccccccgttttcaaggcgcttttgtttactgtgtatgcatgtatctcacggctgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gtgaccccccgttttcaaggcgcttttgtttactgtgtatgcatgtatctcacggctgta 453
Query: 241 tcggacaatttgtccatagaaagctcgtttgttggaactttttttcaccaacaaacgaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tcggacaatttgtccatagaaagctcgtttgttggaactttttttcaccaacaaacgaag 513
Query: 301 tcttctcgaatacgaaagtttgaaatttgaatcgataaaccgatccattctctggtagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tcttctcgaatacgaaagtttgaaatttgaatcgataaaccgatccattctctggtagga 573
Query: 361 aagacagaatatatatatatatatwtatattctgtctttc 400
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 574 aagacagaatatatatatatatatatatattctgtctttc 613
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6565
Number of Sequences: 1807
Number of extensions: 6565
Number of successful extensions: 2140
Number of sequences better than 1.0e-20: 1
length of query: 403
length of database: 10,358,551
effective HSP length: 16
effective length of query: 387
effective length of database: 10,329,639
effective search space: 3997570293
effective search space used: 3997570293
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)